3DC5
Crystal Structure of a manganese superoxide dismutases from Caenorhabditis elegans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-05-25 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.060 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 81.780, 81.780, 136.031 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.070 - 1.700 |
R-factor | 0.1912 |
Rwork | 0.189 |
R-free | 0.22596 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1n0j |
RMSD bond length | 0.013 |
RMSD bond angle | 1.398 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.070 | 1.790 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.076 | 0.364 |
Number of reflections | 49346 | |
<I/σ(I)> | 5 | 2.9 |
Completeness [%] | 96.2 | 95.8 |
Redundancy | 3.7 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9.2 | 291 | 2.7M ammonium sulphate, 0.1M bicine, pH9.2, VAPOR DIFFUSION, SITTING DROP, temperature 291K |