Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3DBP

Crystal Structure of Human Orotidine 5'-Monophosphate Decarboxylase Complexed with 6-NH2-UMP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F2
Synchrotron siteCHESS
BeamlineF2
Temperature [K]100
Detector technologyCCD
Collection date2008-04-28
DetectorADSC QUANTUM 210
Wavelength(s)0.978654
Spacegroup nameP 1 21 1
Unit cell lengths69.118, 61.558, 70.565
Unit cell angles90.00, 112.76, 90.00
Refinement procedure
Resolution18.670 - 1.500
R-factor0.1659
Rwork0.165
R-free0.18890
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2p1f
RMSD bond length0.010
RMSD bond angle1.517
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.4.0066)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.550
High resolution limit [Å]1.5001.500
Rmerge0.0630.293
Number of reflections84448
<I/σ(I)>12.94
Completeness [%]99.9100
Redundancy3.73.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.4293Ammonium Sulfate, pH 8.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon