3D64
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Burkholderia pseudomallei
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-04-02 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.03317 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 186.363, 186.363, 104.403 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 2.300 |
R-factor | 0.172 |
Rwork | 0.171 |
R-free | 0.20200 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.246 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.4.0067) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.380 |
High resolution limit [Å] | 2.300 | 4.950 | 2.300 |
Rmerge | 0.125 | 0.043 | 0.649 |
Number of reflections | 92618 | ||
<I/σ(I)> | 7.7 | ||
Completeness [%] | 100.0 | 100 | 99.9 |
Redundancy | 6.8 | 6.8 | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.25 | 289 | 21.5 mg/ml Protein, 20% PEG 3350, 200mM Na acetate, 5% Glycerol, 25mM Hepes, 500mM NaCl, 0.025M Na Azide, pH 7.25, VAPOR DIFFUSION, SITTING DROP, temperature 289K |