3D4T
Crystal structure of the periplasmic thioredoxin SoxS from Paracoccus pantotrophus (oxidized form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | OXFORD DIFFRACTION ENHANCED ULTRA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-03-07 |
Detector | OXFORD ONYX CCD |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 81.000, 81.000, 33.100 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 12.040 - 2.050 |
R-factor | 0.17681 |
Rwork | 0.175 |
R-free | 0.21637 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | derived from SoxS MAD data |
RMSD bond length | 0.013 |
RMSD bond angle | 1.608 |
Data reduction software | CrysalisPro |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 12.040 | 2.160 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.125 | 0.500 |
Number of reflections | 7981 | |
<I/σ(I)> | 36.02 | 6.15 |
Completeness [%] | 99.5 | 100 |
Redundancy | 33.61 | 19.65 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.2 | 291 | 0.1M citrate, 0.4M sodium phosphate, 0.4M potassium phosphate, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 291K |