3D2L
Crystal structure of SAM-dependent methyltransferase (ZP_00538691.1) from EXIGUOBACTERIUM SP. 255-15 at 1.90 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-01-23 |
Detector | MARMOSAIC 325 mm CCD |
Spacegroup name | P 1 |
Unit cell lengths | 67.830, 70.920, 77.190 |
Unit cell angles | 116.57, 104.63, 102.32 |
Refinement procedure
Resolution | 29.374 - 1.900 |
R-factor | 0.189 |
Rwork | 0.187 |
R-free | 0.22900 |
Structure solution method | SAD |
RMSD bond length | 0.015 |
RMSD bond angle | 1.587 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SOLVE |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.374 | 29.370 | 1.970 |
High resolution limit [Å] | 1.900 | 4.080 | 1.900 |
Rmerge | 0.051 | 0.024 | 0.649 |
Number of reflections | 84662 | 17817 | 11976 |
<I/σ(I)> | 14.73 | 38.4 | 2.28 |
Completeness [%] | 92.2 | 96 | 63.7 |
Redundancy | 7.86 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.2000M MgCl2, 20.0000% PEG-8000, 0.1M TRIS pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |