Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3D2H

Structure of berberine bridge enzyme from Eschscholzia californica, monoclinic crystal form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X13
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX13
Temperature [K]100
Detector technologyCCD
Collection date2007-10-20
DetectorMAR CCD 165 mm
Wavelength(s)0.8148
Spacegroup nameC 1 2 1
Unit cell lengths99.913, 94.842, 63.977
Unit cell angles90.00, 100.31, 90.00
Refinement procedure
Resolution25.000 - 1.650
R-factor0.1548
Rwork0.155
R-free0.18640
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.290
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0001.680
High resolution limit [Å]1.6501.650
Number of reflections69824
<I/σ(I)>26.54.6
Completeness [%]98.795.9
Redundancy3.73.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52980.2 M MAGNESIUMCHLORIDE, 30% PEG-4000, 0.1 M TRIS/HCL, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon