Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3D0C

Crystal structure of dihydrodipicolinate synthase from Oceanobacillus iheyensis at 1.9 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2008-04-21
DetectorADSC QUANTUM 315
Wavelength(s)0.97920
Spacegroup nameP 21 21 2
Unit cell lengths157.037, 57.063, 71.457
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.900
R-factor0.218
Rwork0.218
R-free0.24300
Structure solution methodSAD
RMSD bond angle20.700
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwareSHELXCD
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.970
High resolution limit [Å]1.9001.900
Rmerge0.0740.350
Number of reflections50112
<I/σ(I)>10.4
Completeness [%]96.185
Redundancy11.38.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52930.2M Magnesium chloride, 0.1M Lysine, 3% DMSO, 0.1M Tris-HCl pH 8.5, 25% PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon