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3CPJ

Crystal structure of Ypt31 in complex with yeast Rab-GDI

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyCCD
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.931
Spacegroup nameP 1 21 1
Unit cell lengths65.940, 61.430, 92.750
Unit cell angles90.00, 103.68, 90.00
Refinement procedure
Resolution19.790 - 2.350
R-factor0.20156
Rwork0.199
R-free0.25523
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ukv chain G
RMSD bond length0.009
RMSD bond angle1.102
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.7902.400
High resolution limit [Å]2.3502.350
Number of reflections30683
Completeness [%]99.799.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529320% PEG 3350, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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