Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3CA1

Sambucus nigra agglutinin II (SNA-II)- tetragonal crystal form- complexed to galactose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM30A
Synchrotron siteESRF
BeamlineBM30A
Temperature [K]100
Detector technologyCCD
Collection date2003-09-26
DetectorMAR CCD 165 mm
Wavelength(s)0.9795
Spacegroup nameI 41 2 2
Unit cell lengths126.124, 126.124, 76.039
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 1.550
R-factor0.11885
Rwork0.117
R-free0.16310
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)sambucus nigra agglutinin II tetragonal crystal from
RMSD bond length0.020
RMSD bond angle1.925
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareREFMAC (5.2.0019)
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.7401.640
High resolution limit [Å]1.5501.550
Rmerge0.0520.135
Number of reflections42644
<I/σ(I)>21.57.1
Completeness [%]96.678
Redundancy4.42.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.5293PROTEIN 16 MG/ML, AMMONIUM SULFATE 2.0 M, SODIUM ACETATE 100 mM, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon