3BOF
Cobalamin-dependent methionine synthase (1-566) from Thermotoga maritima complexed with Zn2+ and Homocysteine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Detector technology | CCD |
Collection date | 2007-04-01 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 59.067, 86.308, 125.879 |
Unit cell angles | 90.00, 100.03, 90.00 |
Refinement procedure
Resolution | 46.680 - 1.700 |
R-factor | 0.196 |
Rwork | 0.195 |
R-free | 0.22200 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.419 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | EPMR |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.680 | 1.800 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.059 | 0.323 |
Number of reflections | 136540 | |
<I/σ(I)> | 22.5 | 5.36 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 5.8 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 25% 1,2-propanediol, 10% glycerol, 5% PEG 3000, 100 mM potasium citrate pH 4.8, 1.5% 1,2,3-heptanetriol, 10 mM YCl3. Soaking with 20% 1,2-propanediol, 10% glycerol, 5% PEG 3000, 100 mM TRIS pH 7, 1.5% 1,2,3-heptanetriol, and 10mM Hcy , VAPOR DIFFUSION, HANGING DROP, temperature 277K |