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3BLT

Crystal structures of YopH complexed with PVSN and PVS, inhibitors of YopH which co-valent bind to Cys of active site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths49.237, 55.609, 97.545
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.200
Rwork0.180
R-free0.22600
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)1pa9
RMSD bond length0.006
RMSD bond angle1.240
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]2.000
Rmerge0.047
Number of reflections16695
<I/σ(I)>15.2
Completeness [%]92.1
Redundancy3.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529825% w/v poly(ethylene glycol) 3350, 100 mM NaCl ,and 100 mM HEPES buffer (pH7.5). , VAPOR DIFFUSION, HANGING DROP, temperature 298K

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PDB entries from 2024-05-15

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