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3BDN

Crystal Structure of the Lambda Repressor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyCCD
Collection date2002-11-15
DetectorADSC QUANTUM 315
Wavelength(s)1.0
Spacegroup nameC 2 2 2
Unit cell lengths74.431, 161.099, 135.256
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.610 - 3.909
R-factor0.29597
Rwork0.292
R-free0.37413
Starting model (for MR)1lmb 1f39
RMSD bond length0.020
RMSD bond angle1.773
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMLPHARE
Refinement softwareREFMAC (5.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.6104.140
High resolution limit [Å]3.9093.909
Rmerge0.0480.176
Number of reflections7238
<I/σ(I)>21.28
Completeness [%]99.0100
Redundancy109.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.629414% PEG 4000, 0.1 M Sodium Acetate pH 4.6, 0.2 M Ammonium Sulfate, 0.05 M Magnesium Chloride, 20% Glycerol, 1 mM Spermine, VAPOR DIFFUSION, HANGING DROP, temperature 294K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111PEG 4000
1012MgCl2
1112Glycerol
1212spermine
211Sodium Acetate
311(NH4)2SO4
411MgCl2
511Glycerol
611spermine
712PEG 4000
812Sodium Acetate
912(NH4)2SO4

246031

PDB entries from 2025-12-10

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