3B04
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with oIPP.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
Synchrotron site | Photon Factory |
Beamline | AR-NE3A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2010-11-20 |
Detector | ADSC QUANTUM 270 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 101.234, 101.234, 337.420 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.480 - 2.300 |
R-factor | 0.18777 |
Rwork | 0.186 |
R-free | 0.22007 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.023 |
RMSD bond angle | 1.927 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.086 | |
Number of reflections | 75931 | |
<I/σ(I)> | 21.3 | 2 |
Completeness [%] | 96.1 | 71.1 |
Redundancy | 6.7 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 293 | 30% PEG 400, 0.2M SODIUM CITRATE, 0.1M TRIS-HCL, pH 8.0, VAPOR DIFFUSION, temperature 293K |