3AST
Crystal structure of P domain Q389N mutant from Norovirus Funabashi258 stain in the complex with Lewis-b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2010-10-27 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 31 |
Unit cell lengths | 74.966, 74.966, 107.250 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 23.920 - 1.400 |
R-factor | 0.19752 |
Rwork | 0.197 |
R-free | 0.21201 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ass |
RMSD bond length | 0.006 |
RMSD bond angle | 1.054 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.450 |
High resolution limit [Å] | 1.400 | 3.020 | 1.400 |
Rmerge | 0.082 | 0.078 | 0.190 |
Number of reflections | 124888 | ||
<I/σ(I)> | 30.4 | ||
Completeness [%] | 94.8 | 56.3 | 98.2 |
Redundancy | 8 | 6.7 | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | hanging drop | 4.6 | 298 | PEG 6000, hexanediol, pH 4.6, hanging drop, temperature 298K |