3ASQ
Crystal structure of P domain from Norovirus Funabashi258 stain in the complex with H-antigen
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2008-11-10 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 31 |
Unit cell lengths | 74.690, 74.690, 107.106 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 35.260 - 1.600 |
R-factor | 0.17915 |
Rwork | 0.178 |
R-free | 0.19353 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.050 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.630 |
High resolution limit [Å] | 1.600 | 4.340 | 1.600 |
Rmerge | 0.080 | 0.059 | 0.389 |
Number of reflections | 88096 | ||
<I/σ(I)> | 12.9 | ||
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 11.3 | 10.7 | 11.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | hanging drop | 4.6 | 298 | PEG 6000, hexanediol, pH 4.6, hanging drop, temperature 298K |