Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3A5D

Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Collection date2007-10-12
Wavelength(s)1.0000
Spacegroup nameP 3 2 1
Unit cell lengths380.701, 380.701, 147.971
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.970 - 4.800
R-factor0.441
Rwork0.441
R-free0.45400
Structure solution methodCombination of MR and MIR
Starting model (for MR)2hld
RMSD bond length0.023
RMSD bond angle2.600
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSOLVE
Refinement softwareCNS (1.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0004.970
High resolution limit [Å]4.8004.800
Number of reflections57305
<I/σ(I)>13.42.1
Completeness [%]95.289.8
Redundancy5.22.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP62931.6M ammonium sulfate, 0.1M MES-NaOH (pH6.0), 10% dioxane, VAPOR DIFFUSION, SITTING DROP, temperature 293K

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon