2BTV
ATOMIC MODEL FOR BLUETONGUE VIRUS (BTV) CORE
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SRS BEAMLINE PX9.6 |
Synchrotron site | SRS |
Beamline | PX9.6 |
Temperature [K] | 281 |
Detector technology | IMAGE PLATE |
Detector | MAR scanner 300 mm plate |
Spacegroup name | P 21 21 2 |
格子定数 [Å] | 795.600, 821.800, 753.300 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 100.000 - 3.500 |
R因子 | 0.266 |
Rwork | 0.266 |
Structure solution method | MOLECULAR REPLACEMENT |
結合長の平均二乗偏差(RMSD) [Å] | 0.007 |
結合角の平均二乗偏差(RMSD) [度] | 24.430 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR |
Refinement software | X-PLOR (3.1) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 100.000 | 4.000 |
分解能 [Å] (高) | 3.500 | 3.500 |
Rmerge_l_obs | 0.229 | 0.677 * |
Total number of observations | 3299866 * | |
独立反射数 | 21510811 * | |
<I/σ(I)> | 2.9 | 0.72 |
完全性 [%] | 53.5 * | 78 * |
冗長性 | 6.5 | 1.06 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | Vapor diffusion, sitting drop * | 8 | Burroughs, J.N., (1995) Virology, 210, 217. * |
文献の結晶化試薬
ID | 結晶ID | 溶液 | 試薬名 | 濃度 (単位) (単位) | 詳細 |
1 | 1 | reservoir | ammonium sulfate | 11-16 (%sat) | |
2 | 1 | reservoir | Tris-HCl | 0.1 (M) | |
3 | 1 | reservoir | ethylene glycol | 15 (%) | |
4 | 1 | drop | protein | 3 (mg/ml) |