2ZYW
crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAP and p-nitrophenol, obtained by two-step soaking method
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | RIGAKU JUPITER 210 |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 155.313, 67.838, 42.867 |
Unit cell angles | 90.00, 105.25, 90.00 |
Refinement procedure
Resolution | 26.150 - 1.800 |
R-factor | 0.18282 |
Rwork | 0.182 |
R-free | 0.19451 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2zpt |
RMSD bond length | 0.007 |
RMSD bond angle | 1.128 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.044 | 0.387 |
Number of reflections | 39743 | |
<I/σ(I)> | 23.9 | 2.1 |
Completeness [%] | 99.7 | 99.3 |
Redundancy | 3.6 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 16% PEG 10000, 10mM DTT, 100mM Bis-Tris, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |