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2ZYC

Crystal structure of peptidoglycan hydrolase from Sphingomonas sp. A1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL38B1
Synchrotron siteSPring-8
BeamlineBL38B1
Temperature [K]100
Detector technologyCCD
Collection date2008-05-20
DetectorRIGAKU JUPITER 210
Wavelength(s)1.0000
Spacegroup nameP 43 21 2
Unit cell lengths54.280, 54.280, 102.750
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.970 - 1.740
R-factor0.201
Rwork0.199
R-free0.23777
Structure solution methodSAD
RMSD bond length0.008
RMSD bond angle1.019
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSHELXDE
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.800
High resolution limit [Å]1.7401.740
Rmerge0.0550.396
Number of reflections16510
<I/σ(I)>14.64.28
Completeness [%]100.099.9
Redundancy10.89.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52931.0M Ammonium phosphate, 0.1M Tris-HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293.0K
1VAPOR DIFFUSION, SITTING DROP8.52931.0M Ammonium phosphate, 0.1M Tris-HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293.0K

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