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2ZQO

Crystal structure of the earthworm R-type lectin C-half in complex with GalNAc

Replaces:  2AO3
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-6A
Synchrotron sitePhoton Factory
BeamlineBL-6A
Temperature [K]95
Detector technologyCCD
Collection date2004-11-05
DetectorADSC QUANTUM 4
Wavelength(s)1.0
Spacegroup nameC 1 2 1
Unit cell lengths123.210, 34.747, 61.586
Unit cell angles90.00, 104.20, 90.00
Refinement procedure
Resolution48.620 - 1.800
R-factor0.19542
Rwork0.192
R-free0.25981
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1xyf
RMSD bond length0.014
RMSD bond angle1.423
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.860
High resolution limit [Å]1.8001.800
Rmerge0.0980.308
Number of reflections23141
<I/σ(I)>36.18.6
Completeness [%]94.094
Redundancy7.27
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8293sodium chloride, dipotassium hydrogen phosphate, sodium dihydrogen phosphate, imidazole, cadmium chloride, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K

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