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2Z3I

Crystal structure of blasticidin S deaminase (BSD) mutant E56Q complexed with substrate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL45XU
Synchrotron siteSPring-8
BeamlineBL45XU
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Spacegroup nameP 21 21 21
Unit cell lengths55.330, 69.578, 145.990
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.800
R-factor0.178
Rwork0.175
R-free0.22000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1wn5
RMSD bond length0.012
RMSD bond angle1.512
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]1.800
Rmerge0.057
Number of reflections48599
Completeness [%]91.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729320% PEG8000, 0.1M SODIUM CACODYLATE, 50MM MAGNESIUM CHROLIDE, 1MM BLASTICIDIN-S, pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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