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2YGH

SAM-I riboswitch with a G2nA mutation in the Kink turn in complex with S-adenosylmethionine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyCCD
Collection date2011-04-04
DetectorMARRESEARCH
Spacegroup nameP 43 21 2
Unit cell lengths58.460, 58.460, 155.260
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution54.710 - 2.600
R-factor0.2054
Rwork0.200
R-free0.25929
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3gx5
RMSD bond length0.010
RMSD bond angle1.892
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]51.8002.740
High resolution limit [Å]2.6002.600
Rmerge0.0700.380
Number of reflections8929
<I/σ(I)>22.66
Completeness [%]100.0100
Redundancy9.29.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1710 MM MGCL, 40 MM NA-CACODYLATE PH 7, 80 MM KCL, 16 MM SPERMINE-HCL, 14% (V/V) MPD.

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PDB entries from 2024-05-15

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