2YFQ
Crystal structure of Glutamate dehydrogenase from Peptoniphilus asaccharolyticus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-02-15 |
Detector | MARMOSAIC 225 mm CCD |
Spacegroup name | H 3 2 |
Unit cell lengths | 153.314, 153.314, 318.993 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 20.000 - 2.940 |
R-factor | 0.24389 |
Rwork | 0.242 |
R-free | 0.28693 |
Structure solution method | SAD |
Starting model (for MR) | NONE |
RMSD bond length | 0.012 |
RMSD bond angle | 1.439 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | Auto-Rickshaw |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.010 |
High resolution limit [Å] | 2.940 | 2.940 |
Rmerge | 0.120 | 0.590 |
Number of reflections | 58934 | |
<I/σ(I)> | 18.7 | 2.9 |
Completeness [%] | 99.8 | 97.8 |
Redundancy | 11.5 | 8.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7 | 0.1 M SODIUM CACODYLATE PH 6.5, 200 MM NACL |