2YFD
STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEXED WITH Mg and dUMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-12-03 |
Detector | ADSC CCD |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 78.090, 149.529, 52.376 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.934 - 1.767 |
R-factor | 0.1857 |
Rwork | 0.184 |
R-free | 0.21140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2yf9 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.058 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.840 | 1.860 |
High resolution limit [Å] | 1.770 | 1.770 |
Rmerge | 0.070 | 0.460 |
Number of reflections | 57356 | |
<I/σ(I)> | 17.2 | 3.1 |
Completeness [%] | 94.3 | 75 |
Redundancy | 5.1 | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 0.18 M LITHIUM ACETATE, 20% (W/V) PEG 3350, 10MM DUTP, 10MM MAGNESIUM CHLORIDE. |