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2Y8B

VIM-7 with Oxidised. Structural and computational investigations of VIM-7: Insights into the substrate specificity of VIM metallo-beta- lactamases

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyCCD
DetectorADSC CCD
Spacegroup nameP 43
Unit cell lengths69.758, 69.758, 46.942
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.000 - 1.700
R-factor0.17535
Rwork0.171
R-free0.21472
Structure solution methodOTHER
Starting model (for MR)NONE
RMSD bond length0.018
RMSD bond angle1.685
Data reduction softwareXDS
Data scaling softwareXDS
Refinement softwareREFMAC (5.5.0102)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.0001.790
High resolution limit [Å]1.7001.700
Rmerge0.0600.380
Number of reflections24756
<I/σ(I)>12.12.3
Completeness [%]99.295
Redundancy3.22.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1522.5-23.5% POLYETHYLENE GLYCOL MONOMETHYL ETHERS (PEG MME) 2K, 0.1 M CALCIUM ACETATE AND 0.1 M SODIUM CACODYLATE PH 5.0

246031

PDB entries from 2025-12-10

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