2Y77
Structure of Mycobacterium tuberculosis type II dehydroquinase complexed with (1R,4S,5R)-3-(benzo(b)thiophen-2-ylmethoxy)-1,4,5- trihydroxy-2-(thiophen-2-ylmethyl)cyclohex-2-enecarboxylate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM16 |
Synchrotron site | ESRF |
Beamline | BM16 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-11-20 |
Detector | ADSC QUANTUM 210r |
Spacegroup name | F 2 3 |
Unit cell lengths | 125.800, 125.800, 125.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.500 |
R-factor | 0.16244 |
Rwork | 0.161 |
R-free | 0.18388 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1h0s |
RMSD bond length | 0.014 |
RMSD bond angle | 1.539 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.5.0109) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.500 | 1.480 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.060 | 0.400 |
Number of reflections | 30571 | |
<I/σ(I)> | 7.5 | 2 |
Completeness [%] | 94.3 | 64.9 |
Redundancy | 7.5 | 1.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.5 | 33% (V/V) 2-METHYL-2, 4-PENTANEDIOL, 0.3 M AMMONIUM SULPHATE, 0.1 M HEPES-NAOH PH 7.5 50 MM TRIS-HCL PH 7.5, 1 MM 2-MERCAPTOETHANOL, 1 MM EDTA, 200 MM SODIUM CHLORIDE, 12.5 MM SODIUM (1R,4S,5R)- 3-(1-BENZOTHIOPHEN-2-YLMETHOXY)-1,4,5-TRIHYDROXY-2-(THIOPHEN- 2-YLMETHYL) CYCLOHEX-2-ENE-1-CARBOXYLATE. |