2Y26
Transmission defective mutant of Grapevine Fanleaf virus
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE BM30A |
| Synchrotron site | ESRF |
| Beamline | BM30A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2008-11-08 |
| Detector | ADSC QUANTUM 315r |
| Spacegroup name | P 21 3 |
| Unit cell lengths | 408.000, 408.000, 408.000 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 35.784 - 2.700 |
| R-factor | 0.1934 |
| Rwork | 0.193 |
| R-free | 0.21030 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | EM MAP |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.188 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | AMoRE |
| Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 38.000 | 2.770 |
| High resolution limit [Å] | 2.700 | 2.700 |
| Rmerge | 0.130 | 0.910 |
| Number of reflections | 604343 | |
| <I/σ(I)> | 17.25 | 1.31 |
| Completeness [%] | 98.9 | 91.7 |
| Redundancy | 10.7 | 3.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | LARGE CRYSTALS OF GFLV-TD WERE GROWN IN 10 DAYS AT 293K BY VAPOR DIFFUSION (1 MICROLITER SITTING DROPS) WITH A VIRUS SOLUTION AT 4 MG/ML AND A RESERVOIR CONTAINING 7% (M/V) PEG 3350, 0.1 M HEPES NA PH 7.5, 0.2 M PROLINE. |






