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2Y0E

BceC and the final step of UGDs reaction

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-1
Synchrotron siteESRF
BeamlineID14-1
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 210
Spacegroup nameP 21 21 21
Unit cell lengths97.631, 108.933, 187.708
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.689 - 1.750
R-factor0.1649
Rwork0.163
R-free0.19670
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PRELIMINARY (MAINLY POLY-ALA) MODEL OF SPHINGOMONAS ELODEA UGD (SEE REFERENCE 2 IN REMARK 1)
RMSD bond length0.012
RMSD bond angle1.398
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.5601.840
High resolution limit [Å]1.7501.750
Rmerge0.0700.320
Number of reflections197721
<I/σ(I)>6.72
Completeness [%]98.499.7
Redundancy3.83.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.5293AT 293 K UPON VAPOR DIFFUSION OF SITTING DROPS OF 1 MICRO-LITER PROTEIN SOLUTION (5 MG/ML PROTEIN, 25 MM TRIS-HCL PH 8.3, 50 MM NACL, 2.5 MM DTT, 0.25 MM UDP-GLCA, AND 0.5 MM OXIDIZED NAD), AND 1 MICRO-LITER WELL SOLUTION (200 MM AMMONIUM SULPHATE, 100 MM SODIUM ACETATE PH 4.5, 11 % (W/V) PEG 4K, AND 50 MM NAF), EQUILIBRATED AGAINST 500 MICRO-LITER PRECIPITATION SOLUTION IN THE WELL.

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PDB entries from 2024-05-15

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