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2XKD

Structure of Nek2 bound to aminopyrazine compound 12

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyCCD
DetectorADSC CCD
Spacegroup nameC 1 2 1
Unit cell lengths100.280, 57.060, 73.760
Unit cell angles90.00, 127.61, 90.00
Refinement procedure
Resolution31.289 - 1.960
R-factor0.1828
Rwork0.181
R-free0.21690
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2wqo
RMSD bond length0.006
RMSD bond angle0.983
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.9502.070
High resolution limit [Å]1.9601.960
Rmerge0.0690.239
Number of reflections21360
<I/σ(I)>12.24.4
Completeness [%]89.698.2
Redundancy3.53.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1

219869

PDB entries from 2024-05-15

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