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2XK8

Structure of Nek2 bound to aminopyrazine compound 15

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyCCD
DetectorADSC CCD
Spacegroup nameC 1 2 1
Unit cell lengths100.410, 56.910, 80.170
Unit cell angles90.00, 133.30, 90.00
Refinement procedure
Resolution36.538 - 2.001
R-factor0.1746
Rwork0.172
R-free0.21440
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2wqo
RMSD bond length0.007
RMSD bond angle0.945
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0402.110
High resolution limit [Å]2.0002.000
Rmerge0.0610.261
Number of reflections22079
<I/σ(I)>14.34.6
Completeness [%]98.999.6
Redundancy3.13.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
12-10% PEG8000, 100MM TRIS PH6.8

220113

PDB entries from 2024-05-22

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