2XB4
Crystal structures of zinc containing Adenylate kinase from Desulfovibrio gigas
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-2 |
Synchrotron site | ESRF |
Beamline | ID14-2 |
Temperature [K] | 110 |
Detector technology | CCD |
Detector | ADSC QUANTUM 4 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 39.390, 119.440, 149.590 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.920 - 1.800 |
R-factor | 0.17967 |
Rwork | 0.178 |
R-free | 0.21152 |
Structure solution method | MAD |
Starting model (for MR) | NONE |
RMSD bond length | 0.028 |
RMSD bond angle | 2.214 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | autoSHARP |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 23.190 | 1.850 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.070 | 0.340 |
Number of reflections | 31474 | |
<I/σ(I)> | 10.2 | 1.6 |
Completeness [%] | 99.5 | 95.5 |
Redundancy | 6 | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 6.5 | 0.2 M TARTRATE NA/K, 0.1 M MES (PH 6.5) AND 20% PEG 2K OR 8K (THE PROTEIN:WELL SOLUTION RATIO IN THE DROP WAS 1:1, 1:2 OR 1:3 WITH THE FINAL DROP VOLUME OF 4, 6 OR 8 MICRO LITRE) |