2WU9
Crystal structure of peroxisomal KAT2 from Arabidopsis thaliana
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X12 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X12 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-12-02 |
Detector | MARRESEARCH |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 60.831, 86.670, 72.750 |
Unit cell angles | 90.00, 106.71, 90.00 |
Refinement procedure
Resolution | 34.600 - 1.500 |
R-factor | 0.151 |
Rwork | 0.150 |
R-free | 0.17800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2wua |
RMSD bond length | 0.006 |
RMSD bond angle | 1.088 |
Data reduction software | MOSFLM |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE: 1.5_2)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.600 | 1.580 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.080 | 0.500 |
Number of reflections | 112318 | |
<I/σ(I)> | 15.2 | 2.6 |
Completeness [%] | 97.2 | 81.2 |
Redundancy | 5.1 | 4.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | HANGING DROP. AT-KAT2 AT 11.8 MG/ML IN 20MM TRIS(HCL) PH9.0, 150MM NACL, 2MM EDTA, 5% (V/V) GLYCEROL, 2MM DTT, 2MM C12-COA AGAINST A WELL SOLUTION CONTAINING 20% (W/V) PEG 3350, 0.2M LI(CH3COO)2, 0.002% ETHYLENE GLYCOL. |