2WPN
Structure of the oxidised, as-isolated NiFeSe hydrogenase from D. vulgaris Hildenborough
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-01-30 |
Detector | ADSC CCD |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 60.596, 91.223, 66.751 |
Unit cell angles | 90.00, 101.73, 90.00 |
Refinement procedure
Resolution | 65.360 - 2.040 |
R-factor | 0.147 |
Rwork | 0.144 |
R-free | 0.20097 |
Structure solution method | MAD |
Starting model (for MR) | NONE |
RMSD bond length | 0.017 |
RMSD bond angle | 1.747 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | SHELXCD |
Refinement software | REFMAC (5.5.0088) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.780 | 2.090 |
High resolution limit [Å] | 2.040 | 2.040 |
Rmerge | 0.070 | 0.220 |
Number of reflections | 44609 | |
<I/σ(I)> | 17.6 | 4.7 |
Completeness [%] | 97.8 | 73.5 |
Redundancy | 5.1 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 8.5 | 1.5 UL OF RESERVOIR SOLUTION CONTAINING 20% POLYETHYLENE GLYCOL (PEG) 1500, 0.1 M TRIS-HCL, PH 8.5 AND AN EQUAL VOLUME OF A SOLUTION COMPOSED OF 10 MG/ML OF PROTEIN IN 10 MM TRIS-HCL BUFFER AT PH 7.6 |