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2WG9

Structure of Oryza Sativa (Rice) PLA2, complex with octanoic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-1
Synchrotron siteESRF
BeamlineID14-1
Temperature [K]100
Detector technologyCCD
DetectorADSC CCD
Spacegroup nameP 62
Unit cell lengths109.159, 109.159, 41.394
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution27.050 - 2.000
R-factor0.18833
Rwork0.187
R-free0.22043
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)NATIVE P62 STRUCTURE
RMSD bond length0.008
RMSD bond angle1.005
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.110
High resolution limit [Å]2.0002.000
Rmerge0.0700.240
Number of reflections18061
<I/σ(I)>12.64.2
Completeness [%]98.490.8
Redundancy3.82.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION293VAPOUR DIFFUSION, 20 DEGREES. WELL CONTAINED 0.75ML OF SOLN A (16-18% PEG3350, 0.1M BISTRISPROPANE PH 6.5, 0.2M POTASSIUM THIOCYANATE) AND 0.25ML OF SOLN B (0.1M SODIUM ACETATE PH 4.6, 2M SODIUM CHLORIDE)

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PDB entries from 2024-05-15

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