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2VIW

Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RUH3R
Temperature [K]93
Detector technologyCCD
DetectorRIGAKU CCD
Spacegroup nameP 21 21 21
Unit cell lengths52.336, 54.118, 80.526
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution27.490 - 2.050
R-factor0.1823
Rwork0.178
R-free0.25970
Structure solution methodOTHER
Starting model (for MR)NONE
Data reduction softwared*TREK
Data scaling softwared*TREK
Refinement softwareBUSTER-TNT (2.1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.4902.060
High resolution limit [Å]2.0502.050
Rmerge0.1000.410
Number of reflections14568
<I/σ(I)>2
Completeness [%]97.795.1
Redundancy2.63
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
16.6PROTEIN WAS CRYSTALLIZED FROM 22-24% PEG4000, 0.17M (NH4)2SO4, 15% GLYCEROL, 0.1M NA(CH3COO) PH=4.0; THEN SOAKED IN 0.001M COMPOUND, 28% PEG4000, 5% GLYCEROL, 0.29M BISTRIS PH=6.6, 0.001M NA(CH3COO), 0.001M (NH4)2SO4

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PDB entries from 2024-05-15

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