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2VIN

Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RUH3R
Temperature [K]93
Detector technologyCCD
DetectorRIGAKU CCD
Spacegroup nameP 21 21 21
Unit cell lengths52.470, 54.277, 80.923
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.730 - 1.900
R-factor0.1733
Rwork0.170
R-free0.23530
Structure solution methodOTHER
Starting model (for MR)NONE
Data reduction softwared*TREK
Data scaling softwared*TREK
Refinement softwareBUSTER-TNT (2.1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]37.7001.970
High resolution limit [Å]1.9001.900
Rmerge0.0600.310
Number of reflections18010
<I/σ(I)>2.3
Completeness [%]95.776.5
Redundancy2.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
16.6PROTEIN WAS CRYSTALLIZED FROM 22-24% PEG4000, 0.17M (NH4)2SO4, 15% GLYCEROL, 0.1M NA(CH3COO) PH=4.0; THEN SOAKED IN 0.05M COMPOUND, 27.5% PEG4000, 0.2M HEPES PH=6.6, 0.1M (NH4)(CH3COO)

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PDB entries from 2024-05-15

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