2REQ
METHYLMALONYL-COA MUTASE, NON-PRODUCTIVE COA COMPLEX, IN OPEN CONFORMATION REPRESENTING SUBSTRATE-FREE STATE
Experimental procedure
| Source type | SYNCHROTRON |
| Source details | ELETTRA BEAMLINE 5.2R |
| Synchrotron site | ELETTRA |
| Beamline | 5.2R |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 1995-07 |
| Detector | MAR scanner 180 mm plate |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 104.950, 162.060, 104.200 |
| Unit cell angles | 90.00, 108.75, 90.00 |
Refinement procedure
| Resolution | 20.000 - 2.500 |
| Rwork | 0.259 |
| R-free | 0.32500 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1req |
| RMSD bond length | 0.012 |
| RMSD bond angle | 0.041 |
| Data reduction software | MOSFLM |
| Data scaling software | CCP4 ((SCALA)) |
| Phasing software | AMoRE |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 | 2.640 |
| High resolution limit [Å] | 2.500 | 2.500 |
| Rmerge | 0.092 | 0.338 |
| Number of reflections | 113512 | |
| <I/σ(I)> | 6 | 2.1 |
| Completeness [%] | 99.8 | 99.7 |
| Redundancy | 4.8 | 3.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 7.5 | 23 * | PROTEIN SOLUTION: 20 MG/ML PROTEIN, 1MM ADENOSYLCOBALAMIN, 2MM COA, 1MM DTT, TRIS -HCL PH 7.5. RESERVOIR SOLUTION: 17.5% (W/V) PEG4000, 20% GLYCEROL (V/V), 100MM TRIS-HCL PH 7.5. EQUAL VOLUMES OF PROTEIN SOLUTION WERE MIXED AND EQUILIBRATED BY VAPOR DIFFUSION., vapor diffusion |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 20 (mg/ml) | |
| 2 | 1 | drop | coenzyme B12 | 1 (mM) | |
| 3 | 1 | drop | CoA | 2 (mM) | |
| 4 | 1 | drop | dithiothreitol | 1 (mM) | |
| 5 | 1 | drop | Tris-HCl | ||
| 6 | 1 | reservoir | PEG4000 | 17.5 (%(w/v)) | |
| 7 | 1 | reservoir | glycerol | 20 (%(v/v)) | |
| 8 | 1 | reservoir | Tris-HCl | 100 (mM) |






