2RE7
Crystal structure of a pyridoxamine 5'-phosphate oxidase related protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-08-20 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.95372, 0.97942 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 106.063, 106.063, 87.218 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.433 - 2.500 |
R-factor | 0.192 |
Rwork | 0.191 |
R-free | 0.22600 |
Structure solution method | MAD |
RMSD bond length | 0.015 |
RMSD bond angle | 1.645 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.433 | 28.433 | 2.560 |
High resolution limit [Å] | 2.500 | 11.180 | 2.500 |
Rmerge | 0.090 | 0.010 | 0.010 |
Total number of observations | 678 | 4683 | |
Number of reflections | 8894 | ||
<I/σ(I)> | 4.2 | 7.5 | 0.7 |
Completeness [%] | 99.9 | 95.3 | 100 |
Redundancy | 7.2 | 5.7 | 7.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 277 | NANODROP, 3.2M (NH4)2SO4, 0.1M MES pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K |