2R6H
Crystal structure of the domain comprising the NAD binding and the FAD binding regions of the NADH:ubiquinone oxidoreductase, Na translocating, F subunit from Porphyromonas gingivalis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-12-18 |
Detector | SBC-3 |
Wavelength(s) | 0.97940 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 175.681, 175.681, 244.292 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.540 - 2.950 |
R-factor | 0.221 |
Rwork | 0.215 |
R-free | 0.27100 |
Structure solution method | SAD |
RMSD bond length | 0.006 |
RMSD bond angle | 0.685 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | SHARP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.540 | 3.060 |
High resolution limit [Å] | 2.950 | 2.950 |
Number of reflections | 40721 | |
<I/σ(I)> | 5.2 | 3.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 17.5 | 16.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | 0.1 M Tris-HCl pH 8.5, 2M Ammonium sulfate, VAPOR DIFFUSION, SITTING DROP, temperature 289K |