2QSY
Human nicotinamide riboside kinase 1 in complex with ADP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-11-18 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.97931 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 54.453, 142.070, 62.263 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.510 - 1.950 |
R-factor | 0.222 |
Rwork | 0.219 |
R-free | 0.26300 |
Structure solution method | SAD |
RMSD bond length | 0.016 |
RMSD bond angle | 1.460 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHELX |
Refinement software | REFMAC (refmac_5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.970 |
High resolution limit [Å] | 1.900 | 4.090 | 1.900 |
Rmerge | 0.122 | 0.061 | 0.709 |
Number of reflections | 19430 | ||
<I/σ(I)> | 6.4 | ||
Completeness [%] | 99.6 | 99.8 | 96.6 |
Redundancy | 6.9 | 6.8 | 5.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 20% PEG 3350, 0.2M Sodium phosphate monobasic, 0.15M D(+)sucrose, 0.1M HEPES, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K |