2QRJ
Crystal Structure of Sulfate-bound Saccharopine Dehydrogenase (L-Lys Forming) from Saccharomyces cerevisiae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RUH3R |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2005-11-08 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 112.628, 55.206, 75.039 |
Unit cell angles | 90.00, 116.24, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.600 |
R-factor | 0.223 |
Rwork | 0.221 |
R-free | 0.26000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2Q99 (BACKBONE ONLY) |
RMSD bond length | 0.016 |
RMSD bond angle | 1.474 |
Data reduction software | d*TREK |
Data scaling software | d*TREK (9.6D) |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.750 | 28.750 | 1.660 |
High resolution limit [Å] | 1.600 | 3.450 | 1.600 |
Rmerge | 0.060 | 0.031 | 0.477 |
Total number of observations | 40780 | 28176 | |
Number of reflections | 53059 | ||
<I/σ(I)> | 11.3 | 37.4 | 3 |
Completeness [%] | 97.1 | 99.5 | 92.9 |
Redundancy | 6.71 | 7.2 | 5.57 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | PEG-MME 2000, Tris, (NH4)2SO4, pH 7.0, vapor diffusion, hanging drop, temperature 277K |