2QOR
Crystal structure of Plasmodium vivax guanylate kinase
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2007-06-15 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97907, 0.97922, 0.91162 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 43.535, 43.535, 342.800 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 37.480 - 1.800 |
R-factor | 0.201 |
Rwork | 0.200 |
R-free | 0.22700 |
Structure solution method | MAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.422 |
Data reduction software | TRUNCATE (CCP4_5.99) |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.840 | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 3.880 | 1.800 |
Rmerge | 0.099 | 0.075 | 0.612 |
Number of reflections | 19333 | ||
<I/σ(I)> | 12.1 | ||
Completeness [%] | 99.7 | 99.7 | 98.2 |
Redundancy | 17.2 | 22 | 9.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 0.1 ul Protein, 0.1 ul Crystallization buffer (65% PEG 400, 0.1M MOPS pH 7.5, 0.1M NaNO3, 5mM GMP), VAPOR DIFFUSION, SITTING DROP, temperature 295K |