2QOM
The crystal structure of the E.coli EspP autotransporter Beta-domain.
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-07-01 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97180, 0.97925, 0.97947 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 84.951, 53.298, 102.418 |
Unit cell angles | 90.00, 103.57, 90.00 |
Refinement procedure
Resolution | 15.000 - 2.660 |
R-factor | 0.25959 |
Rwork | 0.258 |
R-free | 0.28424 |
Structure solution method | MAD folllowed by Molecular Replacement |
Starting model (for MR) | from MAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.286 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.760 |
High resolution limit [Å] | 2.660 | 2.660 |
Rmerge | 0.105 | 0.553 |
Number of reflections | 23299 | |
<I/σ(I)> | 13 | 1.92 |
Completeness [%] | 96.7 | 79.4 |
Redundancy | 6.4 | 5.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.4 | 294 | 0.34M Cymal-1, 1% octylglucoside, 33% PEG 1000, 0.2M NaCl, 0.1M Na cacodylate pH 6.4, 5% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 294K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.4 | 294 | 0.34M Cymal-1, 1% octylglucoside, 33% PEG 1000, 0.2M NaCl, 0.1M Na cacodylate pH 6.4, 5% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 294K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.4 | 294 | 0.34M Cymal-1, 1% octylglucoside, 33% PEG 1000, 0.2M NaCl, 0.1M Na cacodylate pH 6.4, 5% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 294K |