Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2QIZ

Structure of the yeast U-box-containing ubiquitin ligase Ufd2p

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyCCD
Collection date2006-11-21
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)0.97945
Spacegroup nameP 21 21 21
Unit cell lengths65.502, 122.989, 176.411
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.560
R-factor0.226
Rwork0.221
R-free0.27600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB 2QJ0
RMSD bond length0.007
RMSD bond angle1.200
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.650
High resolution limit [Å]2.5602.560
Number of reflections46444
<I/σ(I)>21.62.1
Completeness [%]99.295.2
Redundancy4.23.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.429320% PEG 3350, 0.2M tri-potassium citrate, 5mM DTT, pH 8.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon