2Q6V
Crystal Structure of GumK in complex with UDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X12C |
Synchrotron site | NSLS |
Beamline | X12C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-07-13 |
Detector | MARRESEARCH |
Wavelength(s) | 1.427 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 121.210, 121.210, 170.724 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 104.830 - 2.280 |
R-factor | 0.17746 |
Rwork | 0.175 |
R-free | 0.21641 |
Structure solution method | ARP/wARP |
Starting model (for MR) | 2HY7 Apo protein GumK |
RMSD bond length | 0.017 |
RMSD bond angle | 1.682 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 104.971 | 27.060 | 2.400 |
High resolution limit [Å] | 2.280 | 7.200 | 2.280 |
Rmerge | 0.104 | 0.042 | 0.303 |
Number of reflections | 33916 | ||
<I/σ(I)> | 4.3 | 14.2 | 2.2 |
Completeness [%] | 98.5 | 95 | 93.8 |
Redundancy | 10.1 | 9.6 | 9.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | hanging drop and soaking of crystals in UDPGlcA 100 mM | 8.2 | 293 | 0.1 M Tris-HCl, 35% (w/v) PEG 3350, 0.2 M Li2SO4, 0.1 M LiCl, pH 8.2, hanging drop and soaking of crystals in UDPGlcA 100 mM, temperature 293K |