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2Q3N

Agglutinin from Abrus Precatorius (APA-I)

Replaces:  2AMZ
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X9A
Synchrotron siteNSLS
BeamlineX9A
Temperature [K]298
Detector technologyCCD
Collection date2005-02-15
DetectorMARRESEARCH
Wavelength(s)0.978
Spacegroup nameP 42 21 2
Unit cell lengths141.122, 141.122, 105.253
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.310 - 3.500
R-factor0.20079
Rwork0.195
R-free0.25547
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Abrin-a (PDB code: 1ABR)
RMSD bond length0.013
RMSD bond angle1.725
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.3103.700
High resolution limit [Å]3.5003.500
Rmerge0.0950.539
Number of reflections11360
<I/σ(I)>13.12.3
Completeness [%]95.796.8
Redundancy3.83.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5298PEG 8000, TRIS-HCL BUFFER, PH 8.5, , VAPOR DIFFUSION, HANGING DROP, temperature 298K

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