Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2PYA

Ultra-high resolution structure of P. abyssi rubredoxin W4L/R5S/A44S

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE BW7B
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineBW7B
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2003-12-09
DetectorMAR scanner 345 mm plate
Spacegroup nameP 21 21 21
Unit cell lengths25.385, 39.812, 45.117
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 0.860
R-factor0.098
R-free0.10500
Structure solution methodAB INITIO PHASING
RMSD bond length0.033
RMSD bond angle0.062
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHELXD
Refinement softwareSHELXL-97
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0000.870
High resolution limit [Å]0.8600.860
Number of reflections38349
<I/σ(I)>41.39.64
Completeness [%]96.795.6
Redundancy5.64.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
162933.7 - 4.0 M Sodium Malonate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K, pH 6.00

239149

PDB entries from 2025-07-23

PDB statisticsPDBj update infoContact PDBjnumon