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2PR5

Structural Basis for Light-dependent Signaling in the Dimeric LOV Photosensor YtvA (Dark Structure)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-C
Synchrotron siteAPS
Beamline14-BM-C
Temperature [K]100
Detector technologyCCD
Collection date2006-11-06
DetectorADSC QUANTUM 315
Spacegroup nameP 21 21 2
Unit cell lengths88.846, 91.634, 34.239
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution14.820 - 1.450
R-factor0.192
Rwork0.190
R-free0.22400
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.190
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]15.00015.0001.470
High resolution limit [Å]1.4503.9101.450
Rmerge0.0560.0310.449
Number of reflections48278
<I/σ(I)>9.9
Completeness [%]95.596.499.9
Redundancy6.66.35.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.62980.1 M Na acetate pH 4.6, 18-22 % (w/v) PEG-4000, 75-150 mM ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 298K

219869

PDB entries from 2024-05-15

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