2PM7
Crystal structure of yeast Sec13/31 edge element of the COPII vesicular coat, selenomethionine version
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 200 |
Detector technology | CCD |
Collection date | 2006-04-01 |
Detector | ADSC QUANTUM 4 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 128.190, 52.500, 133.090 |
Unit cell angles | 90.00, 108.34, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.350 |
R-factor | 0.245 |
Rwork | 0.242 |
R-free | 0.29800 |
Structure solution method | SAD |
RMSD bond length | 0.006 |
RMSD bond angle | 1.232 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE (2.06) |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.430 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.047 | 0.247 |
Number of reflections | 68569 | |
<I/σ(I)> | 19.6 | 4.55 |
Completeness [%] | 97.1 | 91.1 |
Redundancy | 3.4 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 15% PEG 4000, 10% DMSO, 6% dioxane, 0.1M Tris-HCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K |