2PKY
The Effect of Deuteration on Protein Structure A High Resolution Comparison of Hydrogenous and Perdeuterated Haloalkane Dehalogenase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2006-01-01 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 94.363, 71.093, 40.035 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.760 - 1.550 |
R-factor | 0.19143 |
Rwork | 0.189 |
R-free | 0.23135 |
Structure solution method | rigid body refinement |
Starting model (for MR) | 1b6g |
RMSD bond length | 0.010 |
RMSD bond angle | 1.198 |
Data reduction software | CrystalClear |
Data scaling software | d*TREK (9.2SSI) |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.760 | 1.620 |
High resolution limit [Å] | 1.530 | 1.550 |
Rmerge | 0.077 | 0.352 |
Number of reflections | 41347 | |
<I/σ(I)> | 9.4 | 1.8 |
Completeness [%] | 83.1 | 16.3 |
Redundancy | 3.52 | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 2.6M ammonium sulfate, 0.1M sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K |